Statistics
RANK
550
of 257.646
REPUTATION
112
CONTRIBUTIONS
0 Questions
31 Answers
ANSWER ACCEPTANCE
0.00%
VOTES RECEIVED
20
RANK
9.188 of 17.753
REPUTATION
63
AVERAGE RATING
5.00
CONTRIBUTIONS
2 Files
DOWNLOADS
11
ALL TIME DOWNLOADS
439
RANK
of 109.916
CONTRIBUTIONS
0 Problems
0 Solutions
SCORE
0
NUMBER OF BADGES
0
CONTRIBUTIONS
0 Posts
CONTRIBUTIONS
0 Public Channels
AVERAGE RATING
CONTRIBUTIONS
0 Highlights
AVERAGE NO. OF LIKES
10 of your answers have been accepted
Awarded to Florian Augustin on 15 Feb 2022
Publish your first review
Awarded to Florian Augustin on 01 Apr 2021
Your submissions received 3 five star ratings
Awarded to Florian Augustin on 06 Aug 2020
Your submissions were downloaded 10 or more times in a month
Awarded to Florian Augustin on 01 May 2020
Have 2 submissions connected to GitHub
Awarded to Florian Augustin on 10 Apr 2020
Publish your first submission
Awarded to Florian Augustin on 27 Feb 2020
Contribute at least one answer each month for 3 consecutive months
Awarded to Florian Augustin on 14 Sep 2019
3 of your answers have been accepted
Awarded to Florian Augustin on 18 Jun 2019
Provide your first answer ever to someone else's question
Awarded to Florian Augustin on 30 Jan 2018
Content Feed
During SSA simulation of sbml model using sbiosimulate, observables are not saved.
Hi Torkel, The model in the SBML file defines assignment rules, which are imported into SimBiology as repeated assignment rules...
3 maanden ago | 0
Import XML File to Simbiology
Hi Aditi, The SBML model in the supplemental material of the paper you are citing imports without error on my computer in MATLA...
3 maanden ago | 0
Using 'time' in observable expressions
Hi Abed, when evaluating expressions of observables, SimBiology first tries to determine whether the result is a scalar value o...
3 maanden ago | 0
| accepted
Can anyone help me in fitting a SVEAIHR epidemic model to the observe data please?
Hi Sonam, Following up on Steven's comment, here are a few general links that may be helpful for how to fit models to data in S...
4 maanden ago | 1
MPGSA questions regarding plot visualizations and log-distributed sampling
Hello Abed, You can use the name-value pair Parameters in the plot or histogram methods to selectively visualize GSA results. Y...
4 maanden ago | 0
Pre-equilibrating models when performing global sensitivity analyses
Hi Abed, You can chain a steady-state analysis and a global sensitivity analysis. For this you first have to run sbiosteadystat...
6 maanden ago | 0
| accepted
Formatting for 'addobservables'
Hi Shaun, expressions of SimBiology observables can only reference names of components on the model, or functions on the Matlab...
6 maanden ago | 1
| accepted
How to organize plot of sbiosobol results
Hello Jesse, You can use the name-value arguments "Parameters" and "Observables" of the plot and bar functions to specify which...
6 maanden ago | 1
| accepted
Simulate different dosing amounts with a schedule dose
Hello, parameterized schedule doses are currently not supported (Matlab release R2021b), only repeat doses can be parameterized...
7 maanden ago | 1
| accepted
Export scan's results to excel using MacOS
Hello, You should be able to export the simulation results on Mac as well as on Windows. Which version of Matlab are you using?...
10 maanden ago | 1
| accepted
How to align diagram blocks, species, etc.?
Hi, Unfortunately, the alignment tools are not available in the SimBiology Model Builder app in Matlab R2020b. Alignment tools ...
10 maanden ago | 0
Global sensitivity analysis: Can the first order effect be greater than the total order effect?
Hi, You are right that first order Sobol indices are always smaller than or equal to the corresponding total order Sobol indic...
11 maanden ago | 1
Exporting SimBiology model with custom units
Hi, Thank you for reporting this issue. There is a bug in sbmlexport, it should be able to export your custom unit. We are loo...
12 maanden ago | 0
Export SimBiology HTML and diagram
Hi, as of SimBiology (R2021a) exporting the model to HTML is only supported in the SimBiology Model Builder app. Functionality ...
12 maanden ago | 0
Submitted
Global Sensitivity Analysis for SimBiology
Compute Sobol indices and perform a multiparametric global sensitivity analysis (MPGSA) of model responses.
ongeveer een jaar ago | 7 downloads |
Parameter transformation in sbiofitmixed
Hi Ben, An alternative idea would be to compute a confidence interval for the fixed effects (for example, estimatedValue + [-1....
ongeveer een jaar ago | 0
Handling incorrect parameter values in sbiofit and sbiofitmixed
Hello Czakó, Unfortunately, it is currently not possible to stop model simulations in SimBiology programatically. A better erro...
ongeveer een jaar ago | 0
| accepted
Combine two models in simbiology, where one of them is a species.
Hi Sudharsana, It sounds like the copy-paste tool in the graphical user interface for SimBiology could help in your case. To op...
meer dan een jaar ago | 1
| accepted
Mathematical calculation required for how matlab simbiology performs local sensitivity analysis for a set of ODEs in simbiology model analyzer. (https://www.mathworks.com/help/simbio/ug/perform-sensitivity-analysis-for-tumor-growth.html)
Hi Darshna, Here is a link with some information for how to interpret the sensitivity (time/bar) plots. The reported values, an...
meer dan een jaar ago | 0
| accepted
Percentage perturbation in Simbiology Local Sensitivity Analysis (https://www.mathworks.com/help/simbio/ug/perform-sensitivity-analysis-for-tumor-growth.html)
Hi Darshna, the sensitivities you are referring to are local derivatives. SimBiology integrates a system of differential equati...
meer dan een jaar ago | 0
| accepted
Unit testing on Simbiology created model
Hi Andrew, That's an interesting project you are investigating! Below are a couple thoughts on how you could go about testing b...
meer dan een jaar ago | 1
| accepted
In Simbiology, how to analyze sensitivity analysis?
Hi, SimBiology supports different ways to analyze sensitivities. Here is a documentation page with an overview and links to dif...
bijna 2 jaar ago | 0
| accepted
Submitted
Model Debugger for SimBiology
The Model Debugger for SimBiology lets you analyze model responses, model structure, and expressions during simulations.
bijna 2 jaar ago | 4 downloads |
Simulating multiple model parameterizations using scenarios and simfunctions
Hi Abed, The short answer why you see the error message is that the SimFunction is being created with one dose input, and it is...
meer dan 2 jaar ago | 0
parfor error for global SA Morris method using SimBiology
Hi, It looks like you are running into an issue that the SimBiology model is not copied to the workers natively. In MATLAB vers...
meer dan 2 jaar ago | 3
| accepted
Computed parameter in Simbiology
Hi Rajeev, You could call the function getequations on your model, getequations(m1). This gives you a printout of the values. I...
bijna 3 jaar ago | 0
| accepted
SimBiology getConfigSet does not recognise model object
Hi Alvaro, I think you are seeing an unfortunate naming collision. SimBiology's method is getconfigset (all lower-case). The me...
bijna 3 jaar ago | 3
| accepted
Simbiology parameter is not recognized by EventFcns
Hi, It looks like the event is changing the value of a parameter that is marked as constant. You can change the "Constant" prop...
bijna 3 jaar ago | 2
| accepted
creating a mesh figure
Hi Parul, If I understand correctly what you are trying to do, then you are very much on the right track. So it is probably onl...
meer dan 3 jaar ago | 0
| accepted
solve 4 equations with some unknowns parameters.
Hi, I think you are using a modern syntax to call 'solve' that was not supported in R2010b. The equivalent call in R2010b wou...
meer dan 3 jaar ago | 1
