embed

Embed discrete data

Since R2020b

Syntax

Y = embed(X,weights)

Y = embed(X,weights,'DataFormat',FMT)

Description

The embed operation converts numeric indices to numeric vectors, where the indices correspond to discrete data. Use embeddings to map discrete data such as categorical values or words to numeric vectors.

Note

This function applies the embed operation to dlarray data. If you want to apply the embed operation within a layerGraph object or Layer array, use a wordEmbeddingLayer (Text Analytics Toolbox) object.

Y = embed(X,weights) returns the embedding vectors in weights corresponding to the numeric indices in the formatted dlarray object X.

Y = embed(X,weights,'DataFormat',FMT)also specifies dimension format FMT when X is not a formatted dlarray object. The output Y is an unformatted dlarray with the same dimension order as X.

Examples

Embed Categorical Data

Embed a mini-batch of categorical features.

Create an array of categorical features containing 5 observations with values "Male" or "Female".

X = categorical(["Male" "Female" "Male" "Female" "Female"])';

Initialize the embedding weights. Specify an embedding dimension of 10, and a vocabulary corresponding to the number of categories of the input data plus one.

embeddingDimension = 10;
vocabularySize = numel(categories(X));
weights = rand(embeddingDimension,vocabularySize+1);

To embed the categorical data, first convert it to mini-batch of numeric indices.

X = double(X)

X = 5×1

     2
     1
     2
     1
     1

For formatted dlarray input, the embed function expands into a singleton 'C' (channel) dimension with size 1. Create a formatted dlarray object containing the data. To specify that the rows correspond to observations, specify the format 'BC' (batch, channel).

dlX = dlarray(X,'BC')

dlX = 
  1(C) x 5(B) dlarray

     2     1     2     1     1

Embed the numeric indices using the embed function. The embed function expands into the 'C' dimension.

dlY = embed(dlX,weights)

dlY = 
  10(C) x 5(B) dlarray

    0.1576    0.8147    0.1576    0.8147    0.8147
    0.9706    0.9058    0.9706    0.9058    0.9058
    0.9572    0.1270    0.9572    0.1270    0.1270
    0.4854    0.9134    0.4854    0.9134    0.9134
    0.8003    0.6324    0.8003    0.6324    0.6324
    0.1419    0.0975    0.1419    0.0975    0.0975
    0.4218    0.2785    0.4218    0.2785    0.2785
    0.9157    0.5469    0.9157    0.5469    0.5469
    0.7922    0.9575    0.7922    0.9575    0.9575
    0.9595    0.9649    0.9595    0.9649    0.9649

In this case, the output is an embeddingDimension-by-N matrix with format 'CB' (channel, batch), where N is the number of observations. Each column contains the embedding vectors.

Embed Text Data

Embed a mini-batch of text data.

textData = [
    "Items are occasionally getting stuck in the scanner spools."
    "Loud rattling and banging sounds are coming from assembler pistons."];

Create an array of tokenized documents.

documents = tokenizedDocument(textData);

To encode text data as sequences of numeric indices, create a wordEncoding object.

enc = wordEncoding(documents);

Initialize the embedding weights. Specify an embedding dimension of 100, and a vocabulary size to be consistent with the vocabulary size corresponding to the number of words in the word encoding plus one.

embeddingDimension = 100;
vocabularySize = enc.NumWords;
weights = rand(embeddingDimension,vocabularySize+1);

Convert the tokenized documents to sequences of word vectors using the doc2sequence function. The doc2sequence function, by default, discards out-of-vocabulary tokens in the input data. To map out-of-vocabulary tokens to the last vector of embedding weights, set the 'UnknownWord' option to 'nan'. The doc2sequence function, by default, left-pads the input sequences with zeros to have the same length

sequences = doc2sequence(enc,documents,'UnknownWord','nan')

sequences=2×1 cell array
    {[         0 1 2 3 4 5 6 7 8 9 10]}
    {[11 12 13 14 15 2 16 17 18 19 10]}

The output is a cell array, where each element corresponds to an observation. Each element is a row vector with elements representing the individual tokens in the corresponding observation including the padding values.

Convert the cell array to a numeric array by vertically concatenating the rows.

X = cat(1,sequences{:})

X = 2×11

     0     1     2     3     4     5     6     7     8     9    10
    11    12    13    14    15     2    16    17    18    19    10

Convert the numeric indices to dlarray. Because the rows and columns of X correspond to observations and time steps, respectively, specify the format 'BT'.

dlX = dlarray(X,'BT')

dlX = 
  2(B) x 11(T) dlarray

     0     1     2     3     4     5     6     7     8     9    10
    11    12    13    14    15     2    16    17    18    19    10

Embed the numeric indices using the embed function. The embed function maps the padding tokens (tokens with index 0) and any other out-of-vocabulary tokens to the same out-of-vocabulary embedding vector.

dlY = embed(dlX,weights);

In this case, the output is an embeddingDimension-by-N-by-S matrix with format 'CBT', where N and S are the number of observations and the number of time steps, respectively. The vector dlY(:,n,t) corresponds to the embedding vector of time-step t of observation n.

Input Arguments

X — Input data

dlarray object | numeric array

Input data, specified as a formatted dlarray, an unformatted dlarray, or a numeric array. The elements of X must be nonnegative integers or NaN.

The function returns the embedding vectors in weights corresponding to the numeric indices in X. If any values in X are zero, NaN, or greater than the vocabulary size, then the function returns the out-of-vocabulary vector for that element.

When X is not a formatted dlarray object, you must specify the dimension label format using the 'DataFormat' option. Also, if X is a numeric array, then weights must be a dlarray object.

The embed operation expands into a singleton channel dimension of the input data specified by the 'C' dimension label. If the data has no specified channel dimension, then the function assumes an unspecified singleton channel dimension.

weights — Embedding weights

dlarray object | numeric array

Embedding weights, specified as a formatted dlarray, an unformatted dlarray, or a numeric array.

The matrix weights specifies the dimension of the embedding, the vocabulary size, and the embedding vectors.

The embedding dimension is the number of components K of the embedding. That is, the embedding maps numeric indices to vectors of length K. The vocabulary size is the number of discrete elements V in the embedding. That is, the number of discrete elements of the underlying data that the embedding supports. The embedding maps out-of-vocabulary indices to the same out-of-vocabulary embedding vector.

If weights is a formatted dlarray object, then it must have format 'CU' or 'UC'. The dimensions corresponding to the labels 'C' and 'U' must have size K and V+1, respectively, where K and V represent the embedding dimension and the vocabulary size, respectively. The extra vector corresponds to the out-of-vocabulary embedding vector.

If weights is not a formatted dlarray object, then weights must be a K-by-(V+1) matrix, where K and V represent the embedding dimension and vocabulary size, respectively.

The function returns the embedding vectors in weights corresponding to the numeric indices in X. If any values in X are zero, NaN, or greater than the vocabulary size, then the function returns the out-of-vocabulary vector for that element.

FMT — Description of data dimensions

character vector | string scalar

Description of the data dimensions, specified as a character vector or string scalar.

A data format is a string of characters, where each character describes the type of the corresponding dimension of the data.

The characters are:

• "S" — Spatial

• "C" — Channel

• "B" — Batch

• "T" — Time

• "U" — Unspecified

For example, for an array containing a batch of sequences where the first, second, and third dimension correspond to channels, observations, and time steps, respectively, you can specify that it has the format "CBT".

You can specify multiple dimensions labeled "S" or "U". You can use the labels "C", "B", and "T" at most once. The software ignores singleton trailing "U" dimensions located after the second dimension.

If the input data is not a formatted dlarray object, then you must specify the FMT option.

For more information, see Deep Learning Data Formats.

Data Types: char | string

Output Arguments

Y — Embedding vectors

dlarray

Embedding vectors, returned as a dlarray object. The output Y has the same underlying data type as the input X.

The function returns the embedding vectors in weights corresponding to the numeric indices in X. If any values in X are zero, NaN, or greater than the vocabulary size, then the function returns the out-of-vocabulary vector for that element.

The embedding vectors have K elements, where K is the embedding dimension. The size of dimensions Y depend on the input data:

• If X is a formatted dlarray with a 'C' dimension label, then the embed operation expands into that dimension. That is, the output has the same dimension format as the input, the 'C' dimension has size K, the other dimensions have the same size as the corresponding dimensions of the input.

• If X is a formatted dlarray without a 'C' dimension. Then the operation assumes a singleton channel dimension. The output has a 'C' dimension and all other dimensions have the same size and dimension labels. That is, the output has the same format as the input and also a 'C' dimension, the 'C' dimension has size K, the other dimensions have the same size as the corresponding dimensions of the input.

• If X is not a formatted dlarray object and 'DataFormat' contains a 'C' dimension, then the embed operation expands into that dimension. That is, the output has the number of dimensions as the input, the dimension corresponding to the 'C' dimension has size K, the other dimensions have the same size as the corresponding dimensions of the input.

• If X is not a formatted dlarray object and 'DataFormat' does not contain a 'C' dimension, then the embed operation inserts a new dimension at the beginning. That is, the output has one more dimension as the input, the first dimension corresponding to the 'C' dimension has size K, the other dimensions have the same size as the corresponding dimensions of the input.

Algorithms

Deep Learning Array Formats

Most deep learning networks and functions operate on different dimensions of the input data in different ways.

For example, an LSTM operation iterates over the time dimension of the input data and a batch normalization operation normalizes over the batch dimension of the input data.

To provide input data with labeled dimensions or input data with additional layout information, you can use data formats.

A data format is a string of characters, where each character describes the type of the corresponding dimension of the data.

The characters are:

• "S" — Spatial

• "C" — Channel

• "B" — Batch

• "T" — Time

• "U" — Unspecified

For example, for an array containing a batch of sequences where the first, second, and third dimension correspond to channels, observations, and time steps, respectively, you can specify that it has the format "CBT".

To create formatted input data, create a dlarray object and specify the format using the second argument.

To provide additional layout information with unformatted data, specify the format using the FMT argument.

For more information, see Deep Learning Data Formats.

Extended Capabilities

GPU Arrays

Accelerate code by running on a graphics processing unit (GPU) using Parallel Computing Toolbox™.

Usage notes and limitations:

• When at least one of the following input arguments is a gpuArray or a dlarray with underlying data of type gpuArray, this function runs on the GPU.

  • X

  • weights

For more information, see Run MATLAB Functions on a GPU (Parallel Computing Toolbox).

Version History

Introduced in R2020b