Analysis of 3-D Structures of Biological Molecules
Analyze and visualize 3-D structures of proteins and other
biomolecules
Analyze PDB structures of proteins and other molecules by performing linear transformations, superposing the coordinates, and generating Ramachandran plots.
Functions
pdbtransform | Apply linear transformation to 3-D structure of molecule |
pdbsuperpose | Superpose 3-D structures of two proteins |
pdbread | Read data from Protein Data Bank (PDB) file |
pdbwrite | Write to file using Protein Data Bank (PDB) format |
pdbdistplot | Visualize intermolecular distances in Protein Data Bank (PDB) file |
ramachandran | Ramachandran plot for Protein Data Bank (PDB) data |
Topics
- Visualizing the Three-Dimensional Structure of a Molecule
This example shows how to display, inspect and annotate the three-dimensional structure of molecules.