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Ekaterina Avershina


Norges miljø- og biovitenskapelige universitet

Active since 2015

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mget error for NCBI server
I need to download .sra files from the NCBI ftp server, if i use wget(wget ftp://ftp-trace.ncbi.nih.gov/long_path/SRRxxxxxx.sra)...

ongeveer 6 jaar ago | 0 answers | 0

0

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Answered
textscan loop works on windows but not on macOS - why?
Guillaume, thank you for the corrections and the suggestion. (a) yes, i do know that the file exist. When i open the file indivi...

bijna 7 jaar ago | 0

Answered
textscan loop works on windows but not on macOS - why?
Guillaume and Stephen, the only reason i used 'ls' and not 'dir' was that this was the command i found when looking in help for ...

bijna 7 jaar ago | 0

Answered
textscan loop works on windows but not on macOS - why?
Thank you for the hint, Guillaume! Without it i would have never guessed what is causing the problem! So fopen fails due to 'too...

bijna 7 jaar ago | 0

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textscan loop works on windows but not on macOS - why?
Hi all, I have a list of files that i need to open, schematically the script looks like: for i=1:length(files) x...

bijna 7 jaar ago | 4 answers | 0

4

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primer design example - why is scoring matrix changed?
I need to design long primers of around 50 bp; and i follow the 'Exploring primer design' example (https://se.mathworks.com/help...

ongeveer 8 jaar ago | 0 answers | 0

0

answers

Question


blastlocal returns an error
I try to blast against a local database that i've created, but blastlocal keeps returning an error (unable to open 'mydatabase.n...

meer dan 9 jaar ago | 0 answers | 0

0

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How to put script on pause instead of quitting when encountering error
I am trying annotate several genomes. So I made a script that first predicts open reading frames and then BLAST-searches those a...

meer dan 9 jaar ago | 2 answers | 0

2

answers