104 results

Iso2Mesh - a 3D surface and volumetric mesh generator for MATLAB/Octave

A Matlab code for Brain MRI Tumor Detection and Classification

A toolbox for the computation of the Fast Marching algorithm in 2D and 3D.

View and Explore a 3D Volumetric Chest Scan

MIP, Color, Slice and Shaded 3D (shearwarp) Volume Rendering, interactive 3D view/measurement GUI

functional connectivity analyses of resting-state or task-based neuroimaging data; CONN toolbox, development version

GUI to open most Medical file-formats: Dicom, V3D, ISI, NifTI, Analyze and other formats

A code for reconstruction and spectral analysis of spectral domain OCT images.

A toolbox to handle reading, viewing, and writing dicom images, supporting simultaneous PET/MR

read_2dseq is highly optimized and versatile Matlab function to read Bruker's 2dseq MRI image file.

A Numerical Simulation Platform for Magnetic Resonance Imaging (MRI)

Quantitative Magnetic Resonance Imaging Made Easy with qMRLab: Use GUI or CLI to fit and simulate a myriad of qMRI models.

Image Despeckle Filtering and Analysis Toolbox

OCTSEG is a GUI and function collection to segment and visualize retinal layers on OCT data.

Neuroimaging Case Study for seminars and webinars.

MATLAB programming tools for radiomics analysis

GUI to calculate and visualize the radiation pattern of ultrasound transducers.

Open-source multi-dimensional tomographic reconstruction software for MATLAB, GNU Octave and Python

A Matlab/Octave toolbox for synthetic aperture ultrasound imaging

MATLAB example using deep learning to classify chronological age from brain MRI images

Ultrasound field simulation for transducer geometries for medical ultrasound and sonar applications.

This code implements the MICO algorithm for MRI tissue segmentation and bias field correction.

A library for DW-MRI Processing, DTI & DKI Estimation, Higher-Order Tensor analysis & Visualization.

Demonstration of graph-based segmentation of retinal layers in an optical coherence tomography image

This code enables measurements of CT MTF and NPS from images of an ACR accreditation phantom.

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis

Diffusion weighted imaging (DWI) and diffusion tensor imaging (DTI) in the heart (myocardium)

Converts Siemens MRI DICOM data into NIfTI format, and/or anonymises and sorts into scan directories

3D Volumetric fMRI visualization

Parametric mapping of MRI data

Superfast Quantitative Susceptibility Mapping from MRI phase data.

Use vectorized marching cubes algorithm to compute triangulated mesh of an isosurface from 3D matrix

Matlab codes for Diffusion MRI CSA-ODF computation, Hough tractography, and connectomic analysis.

This project implements various filters for Speckle Noise Reduction in Ultrasound Images.

Enable setting the window level (contrast and brightness) by dragging

Matlab codes for 3D image fusion, using a wavelet-based approach.

2D and 3D constrained Total Variation using the Split Bregman formulation

This image processing routine can detect tumors presence,location,area,boundary.

16 State of the art image segmentation methods are compared with 117 MRI LV images

Anisotropic Diffusion with Memory based on Speckle Statistics for Ultrasound Images

Superfast MRI field shift calculation based on a known susceptibility distribution.

Implementation of an optical flow algorithm to track muscle length changes imaged with ultrasound.

Toolbox for designing spectral-spatial RF pulses for MRI and MR spectroscopy applications

Medical software for Processing multi-Parametric images Pipelines

PETKM is a simple and free standalone interface for modeling PET images.

OCT image denoising and interpolation

ReadPhilipsScanPhysLog.m reads Philips scanphyslog files, which are created by Philips MRI scanners.

A Matlab toolbox for examining the quality of structural (SNR) and functional (tSNR, SFNR) magnetic resonance imaging (MRI) data

Toolbox for polyenergetic quantitative (polyquant) X-ray CT reconstruction with demos: including metal artifact and scatter correction.

An ImageJ like, Multi-functional, GUI-based Program for Image (Matrix) Processing and Analysis

A Free Software for Quantitative Analysis and Visualization of PET Images

Penalized PET reconstruction using deep learning prior and local linear fitting (TMI 2018)

Segmentation code for breast lesions in ultrasound images

This folder contains a multiplicative noise removal algorithm based on anisotropic diffusion

This program reads in ultrasound videos and automates the process of measuring muscle architecture.

Increasing axial resolution of ultrasonic imaging with a joint sparse representation model

Good for Single dimension scanning

A user friendly GUI for the segmentation and quantification of small animal and human PET images

Reference: www.dtic.upf.edu/~afrangi/ibi/ReconstructionFromProjections.pdf‎Cached

Effective and robust denoising for 4D medical images (e.g. DCE-MRI, fMRI, dynamic PET)