fing barcode from a DNA Sequence

2 Jul 2019
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Updated 1 Aug 2019
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I have a fastq file from that I have to seperate barcode(highlighted with green color) which is sandwiched between V1 and V2. Please suggest which method I can use to obtain this

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KSSV
KSSV on 2 Jul 2019
You have v1 and v2 in hand? Are they known?
anooja thomas
anooja thomas on 3 Jul 2019
yes the are known
Rena Berman
Rena Berman on 1 Aug 2019
(Answers dev) restored edit

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Answers (1)

Vismay Raj
Vismay Raj on 2 Jul 2019

0 votes

Maybe what you are looking for can be achieved through substrings this link can be helpfull

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anooja thomas
anooja thomas
on 2 Jul 2019

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Rena Berman
Rena Berman
on 1 Aug 2019

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