fing barcode from a DNA Sequence

I have a fastq file from that I have to seperate barcode(highlighted with green color) which is sandwiched between V1 and V2. Please suggest which method I can use to obtain this

3 Comments

You have v1 and v2 in hand? Are they known?
yes the are known
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Answers (1)

Vismay Raj
Vismay Raj on 2 Jul 2019
Maybe what you are looking for can be achieved through substrings this link can be helpfull

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on 2 Jul 2019

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on 1 Aug 2019

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