Can I use parallel computing when training a gaussian process with separate length scales for predictors with fitgrp?
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Lauri Nenonen
on 29 Aug 2018
Edited: Lauri Nenonen
on 25 Sep 2018
My code for training the GP looks like this:
gpMdlspeed1 = fitrgp(model1,Speed1,'Basis','constant','FitMethod','exact',... 'PredictMethod','exact','KernelFunction','ardsquaredexponential','KernelParameters',[sigmaM01;sigmaF01],... 'Sigma',sigma01,'Standardize',1,'HyperparameterOptimizationOptions',struct('UseParallel',true), 'Verbose',2 );
But this is not using the parallelpool since my understanding is that hyperparameteroptimizationoptions applies only for bayesianopt optimizer. Is there a way to train this Gaussian process with separate length scales for predictors using parallel computing?
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Accepted Answer
Gautam Pendse
on 25 Sep 2018
Hi Lauri,
Even when there are separate length scales for predictors, these are jointly optimized during training. This optimization proceeds serially by moving from one set of values of the length scales to another set of values such that the log likelihood increases.
To speed up the optimization, you can consider loosening the convergence criterion as in this example:
Hope this helps,
Gautam
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