Apply a filter to a dataset of ecg signals
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I have a dataset of 48 ECG signals (attached here as a zip file, but I use it unzipped), placed in a directory. I have use a for-cicle to load all the signal in the workspace, but now I am a bit confunsed.
I want to apply to the signals a Band-Pass Butterworth filter, so I use butter to design the filter and filtfilt to apply it. But I have a problem with size in "y(i)". This is the error I get:
"Unable to perform assignment because the indices on the left side are not compatible
with the size of the right side."
this is my code:
Fs = 360; % sample frequency of signals [Hz]
files = dir(fullfile("dataset/","*.mat"));
for i = 1:numel(files)
data(i) = load(files(i).name); % load signals
[b,a] = butter(3,[1 30]/(Fs/2),"bandpass"); % bandpass butterworth filter of third order with 1-30 Hz
y(i) = filtfilt(b,a,data(i).val); % apply the filter to all signals
end
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Accepted Answer
Karim
on 17 Jun 2022
Hello, the problem is that you didn't initalize the variable "y". Hence you are trying to fit an array of 1x3600 into a single position (i.e. y(i) ).
See below for a quick fix:
files = dir(fullfile("dataset/","*.mat"));
Fs = 360; % sample frequency of signals [Hz]
[b,a] = butter(3,[1 30]/(Fs/2),"bandpass"); % bandpass butterworth filter of third order with 1-30 Hz
y = zeros(numel(files), 3600);
for i = 1:numel(files)
data(i) = load(fullfile("dataset/",files(i).name)); % load signals
y(i,:) = filtfilt(b,a,data(i).val); % apply the filter to all signals
end
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