Suite2P

Version 1.0.0.0 (2.31 MB) by Marius Pachitariu
Fast, complete two-photon pipeline
5.0
(1)
667 Downloads
Updated 20 Jun 2018
View License on GitHub

Registration, cell detection, spike extraction and manual GUI. Can process data from 10,000 simultaneously-recorded neurons in approximately real-time for several hour recordings. Details in http://biorxiv.org/content/early/2016/06/30/061507.

Cite As

Marius Pachitariu (2024). Suite2P (https://github.com/cortex-lab/Suite2P), GitHub. Retrieved .

MATLAB Release Compatibility
Created with R2015a
Compatible with any release
Platform Compatibility
Windows macOS Linux
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Acknowledgements

Inspired: Catrex GUI

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SpikeDetection

cellDetection

configFiles

correctZDrift

cortexLab

gui2P

neuropilCorrection

preRegistration

readWrite

redChannel

registers2p

registration

registration/old

registration/old/nonRigidRegistration

signalExtraction

svd

tiffTools

utils

utils/EllipseDirectFit

utils/sort_nat

Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
1.0.0.0

fixed file exchange name
To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.