Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data
MATLAB code for the "Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data" webinar.
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This file shows how to use MATLAB and Bioinformatics Toolbox for a typical ChIP-Seq workflow. Key topics include:
Peak detection using wavelet denoising
Working with paired end short reads
Generating coverage plots
Cite As
Richard Willey (2026). Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data (https://nl.mathworks.com/matlabcentral/fileexchange/31369-exploring-protein-dna-binding-sites-from-paired-end-chip-seq-data), MATLAB Central File Exchange. Retrieved .
General Information
- Version 1.0.0.1 (284 KB)
MATLAB Release Compatibility
- Compatible with any release
Platform Compatibility
- Windows
- macOS
- Linux
