File Exchange

image thumbnail

Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data

version 1.0.0.1 (284 KB) by Richard Willey
MATLAB code for the "Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data" webinar.

2 Downloads

Updated 01 Sep 2016

View License

This file shows how to use MATLAB and Bioinformatics Toolbox for a typical ChIP-Seq workflow. Key topics include:
Peak detection using wavelet denoising
Working with paired end short reads
Generating coverage plots

Cite As

Richard Willey (2019). Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data (https://www.mathworks.com/matlabcentral/fileexchange/31369-exploring-protein-dna-binding-sites-from-paired-end-chip-seq-data), MATLAB Central File Exchange. Retrieved .

Comments and Ratings (1)

Updates

1.0.0.1

Updated license

MATLAB Release Compatibility
Created with R2011a
Compatible with any release
Platform Compatibility
Windows macOS Linux