Neuron counting

Count the number of fluorescent cells (tagged with GFP) on noisy background fluorescence
2.2K Downloads
Updated 5 Mar 2010

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% Matlab GUI for neuron counting
% frequency filtering to remove background fluorescence
% Otsu's method for thresholding, with user interaction
% Original image courtesy of Lan Guo

Cite As

EMC_solver (2026). Neuron counting (https://nl.mathworks.com/matlabcentral/fileexchange/26798-neuron-counting), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2008b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Acknowledgements

Inspired by: Image overlay

Version Published Release Notes
1.6.0.0

new GUI interface, tophat for preprocessing, optional outlining colors

1.5.0.0

include colormap for color image display

1.2.0.0

GUI version was made

1.0.0.0