I think I can answer my own question now!
If anyone is interested:
saveas(gca,string(strcat(dataLoc, 'log_check_patient_60/log_histogram/', currentSubject, '.fig')));
dataLoc: the 'root' path of the location where to save th figure
'log_check_patient_60/log_histogram/': the name of the folder (further location specifications, where I want the file to be saved)
currentSubject: the name of the file, which will change with each for loop in my code
'.fig': specification of the figure, can also use .svg for example