Are there a toolbox that help me to represent files .fastq from NGS how array (log2Ratio vs base_position)?
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munoz minjares
on 27 Jan 2015
Commented: munoz minjares
on 21 Apr 2015
I watched the webinar Next Generation sequencing with Bioinformatics Toolbox:...ChIP-Seq Data, but I need to visualize the information in arrays, example HR-CGH, is it possible? I'm not expert in genetic but I want to apply some statistical tools to these data.
Thanks
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Luuk van Oosten
on 10 Apr 2015
Yes. You can import .fastq files that contain NGS data. click here for an intro. To import .fastq files use somthing like:
FASTQStruct = fastqread(yourfile)
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Paola Favaretto
on 9 Apr 2015
Can you provide more details?
.fastq files contain sequence and quality information only. Would you like to plot quality vs. position?
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