How do you convert a tsv or txt file to a GFF file on matlab, with data you've downloading from NCBI or Ensembl ?

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Benjamin Joseph
Benjamin Joseph on 9 May 2014
Answered: Lucio Cetto on 3 Jun 2014
I have a gene data downloaded from NCBI and ensembl, and its a tsv and txt file. Now i need a matlab code to help me convert those files in GFF. Now what steps do i go by in order for this to happen? Thanks and hope someone could help me asap

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Answers (1)

Lucio Cetto
Lucio Cetto on 3 Jun 2014
There is a demo function ( ensemblmart2gff ) in the toolbox/bioinfo/biodemos directory that may help you to get you started.
Lucio

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